Charalampos Kalodimos: search on Z-Library

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1

Dynamic activation of an allosteric regulatory protein

Tzeng, Shiou-Ru, Kalodimos, Charalampos G.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.99 MB

english, 2009

2

Dynamically driven protein allostery

Popovych, Nataliya, Sun, Shangjin, Ebright, Richard H, Kalodimos, Charalampos G

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 1.90 MB

english, 2006

3

Protein function and allostery: a dynamic relationship

Charalampos G. Kalodimos

Journal:

Annals of the New York Academy of Sciences

Year:

2012

Language:

english

File:

PDF, 717 KB

english, 2012

4

Protein activity regulation by conformational entropy

Tzeng, Shiou-Ru, Kalodimos, Charalampos G.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.13 MB

english, 2012

5

Computational design of ligand-binding proteins with high affinity and selectivity

Tinberg, Christine E., Khare, Sagar D., Dou, Jiayi, Doyle, Lindsey, Nelson, Jorgen W., Schena, Alberto, Jankowski, Wojciech, Kalodimos, Charalampos G., Johnsson, Kai, Stoddard, Barry L., Baker, David

Journal:

Year:

2013

Language:

english

File:

PDF, 2.96 MB

english, 2013

6

15N and13C- SOFAST-HMQC editing enhances 3D-NOESY sensitivity in highly deuterated, selectively [1H,13C]-labeled proteins

Rossi, Paolo, Xia, Youlin, Khanra, Nandish, Veglia, Gianluigi, Kalodimos, Charalampos G.

Journal:

Journal of Biomolecular NMR

Year:

2016

Language:

english

File:

PDF, 1.74 MB

english, 2016

7

Enzymes at work are enzymes in motion

Saleh, Tamjeed, Kalodimos, Charalampos G.

Journal:

Year:

2017

Language:

english

File:

PDF, 546 KB

english, 2017

8

Structures of Large Protein Complexes Determined by Nuclear Magnetic Resonance Spectroscopy

Huang, Chengdong, Kalodimos, Charalampos G.

Journal:

Annual Review of Biophysics

Year:

2017

Language:

english

File:

PDF, 9.37 MB

english, 2017

9

Gleevec Can Act as an Allosteric Activator of ABL Kinase

Xie, Tao, Saleh, Tamjeed, Kalodimos, Charalampos G.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 46 KB

english, 2018

10

13C- and 57Fe-NMR studies of the FeCO unit of heme proteins and synthetic model compounds in solution: Comparison with IR vibrational frequencies and X-ray structural data

Charalampos G. Kalodimos, Ioannis P. Gerothanassis, Geoffrey E. Hawkes

Journal:

Biospectroscopy

Year:

1998

Language:

english

File:

PDF, 281 KB

english, 1998

11

Toward an Integrated Model of Protein-DNA Recognition as Inferred from NMR Studies on the Lac Repressor System

Charalampos G. Kalodimos, Rolf Boelens, Robert Kaptein

Journal:

Year:

2004

File:

PDF, 7 KB

2004

12

The Effects of Atropisomerism and Porphyrin Deformation on57Fe Shieldings in Superstructured Hemoprotein Models

Ioannis P. Gerothanassis, Charalampos G. Kalodimos, Geoffrey E. Hawkes, Peter Haycock

Journal:

Journal of Magnetic Resonance

Year:

1998

Language:

english

File:

PDF, 86 KB

english, 1998

13

Multinuclear (13C, 17O, 57Fe) NMR studies of carbonmonoxy heme proteins and synthetic model compounds

Charalampos G. Kalodimos, Ioannis P. Gerothanassis, Roberta Pierattelli, Anastasios Troganis

Journal:

Journal of Inorganic Biochemistry

Year:

2000

Language:

english

File:

PDF, 333 KB

english, 2000

14

Crk and CrkL adaptor proteins: networks for physiological and pathological signaling

Raymond B Birge, Charalampos Kalodimos, Fuyuhiko Inagaki, Shinya Tanaka

Journal:

Cell Communication and Signaling

Year:

2009

Language:

english

File:

PDF, 1.89 MB

english, 2009

15

NMR reveals novel mechanisms of protein activity regulation

Charalampos G. Kalodimos

Journal:

Protein Science

Year:

2011

Language:

english

File:

PDF, 543 KB

english, 2011

16

Assembly of the translocase motor onto the preprotein-conducting channel

Spyridoula Karamanou, Vassiliki Bariami, Efrosyni Papanikou, Charalampos G. Kalodimos, Anastassios Economou

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 1021 KB

english, 2008

17

Signal peptides are allosteric activators of the protein translocase

Gouridis, Giorgos, Karamanou, Spyridoula, Gelis, Ioannis, Kalodimos, Charalampos G., Economou, Anastassios

Journal:

Year:

2009

Language:

english

File:

PDF, 832 KB

english, 2009

18

Structural basis for regulation of the Crk signaling protein by a proline switch

Sarkar, Paramita, Saleh, Tamjeed, Tzeng, Shiou-Ru, Birge, Raymond B, Kalodimos, Charalampos G

Journal:

Nature Chemical Biology

Year:

2010

Language:

english

File:

PDF, 1.57 MB

english, 2010

19

A residue-specific view of the association and dissociation pathway in protein–DNA recognition

Kalodimos, Charalampos G., Boelens, Rolf, Kaptein, Robert

Journal:

Natural Structural Biology

Year:

2002

Language:

english

File:

PDF, 892 KB

english, 2002

20

Disorder-order folding transitions underlie catalysis in the helicase motor of SecA

Keramisanou, Dimitra, Biris, Nikolaos, Gelis, Ioannis, Sianidis, Georgios, Karamanou, Spyridoula, Economou, Anastassios, Kalodimos, Charalampos G

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 746 KB

english, 2006

21

Preprotein-controlled catalysis in the helicase motor of SecA

Karamanou, Spyridoula, Gouridis, Giorgos, Papanikou, Efrosyni, Sianidis, Giorgos, Gelis, Ioannis, Keramisanou, Dimitra, Vrontou, Eleftheria, Kalodimos, Charalampos G, Economou, Anastassios

Journal:

The EMBO Journal

Year:

2007

Language:

english

File:

PDF, 475 KB

english, 2007

22

13C shieldings,18O isotope effects on13C shieldings, and57Fe-13C spin couplings of the Fe-C-O unit in superstructured hemoprotein models: Comparison with hemoproteins, C-O vibrational frequencies, and X-ray structural data

Charalampos G. Kalodimos, Ioannis P. Gerothanassis, Anastasios Troganis, Bernard Loock, Michel Momenteau

Journal:

Journal of Biomolecular NMR

Year:

1998

Language:

english

File:

PDF, 150 KB

english, 1998

23

Domain organization differences explain Bcr-Abl's preference for CrkL over CrkII

Jankowski, Wojciech, Saleh, Tamjeed, Pai, Ming-Tao, Sriram, Ganapathy, Birge, Raymond B, Kalodimos, Charalampos G

Journal:

Nature Chemical Biology

Year:

2012

Language:

english

File:

PDF, 2.59 MB

english, 2012

24

Protein dynamics and allostery: an NMR view

Shiou-Ru Tzeng, Charalampos G Kalodimos

Journal:

Current Opinion in Structural Biology

Year:

2011

Language:

english

File:

PDF, 204 KB

english, 2011

25

Structural Instability Tuning as a Regulatory Mechanism in Protein-Protein Interactions

Li Chen, Vassilia Balabanidou, David P. Remeta, Conceição A.S.A. Minetti, Athina G. Portaliou, Anastassios Economou, Charalampos G. Kalodimos

Journal:

Year:

2011

Language:

english

File:

PDF, 2.09 MB

english, 2011

26

Structural Basis for Signal-Sequence Recognition by the Translocase Motor SecA as Determined by NMR

Ioannis Gelis, Alexandre M.J.J. Bonvin, Dimitra Keramisanou, Marina Koukaki, Giorgos Gouridis, Spyridoula Karamanou, Anastassios Economou, Charalampos G. Kalodimos

Journal:

Year:

2007

Language:

english

File:

PDF, 2.35 MB

english, 2007

27

Proline cis-trans Isomerization Controls Autoinhibition of a Signaling Protein

Paramita Sarkar, Charles Reichman, Tamjeed Saleh, Raymond B. Birge, Charalampos G. Kalodimos

Journal:

Year:

2007

Language:

english

File:

PDF, 1.89 MB

english, 2007

28

An alternate conformation of the hyperthermostable HU protein from Thermotoga maritima has unexpectedly high flexibility

Michael A Durney, Rainer W Wechselberger, Charalampos G Kalodimos, Robert Kaptein, Constantinos E Vorgias, Rolf Boelens

Journal:

Year:

2004

Language:

english

File:

PDF, 354 KB

english, 2004

29

NMR disentangles a dynamic disaggregase machinery

Saio, Tomohide, Kalodimos, Charalampos G

Journal:

Nature Structural and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 830 KB

english, 2013

30

Allosteric inhibition through suppression of transient conformational states

Tzeng, Shiou-Ru, Kalodimos, Charalampos G

Journal:

Nature Chemical Biology

Year:

2013

Language:

english

File:

PDF, 967 KB

english, 2013

31

Regulation of Biological Function by Allosteric Interactions

Kalodimos, Charalampos

Journal:

Journal of Molecular Biology

Year:

2013

Language:

english

File:

PDF, 108 KB

english, 2013

32

Substrate-Activated Conformational Switch on Chaperones Encodes a Targeting Signal in Type III Secretion

Chen, Li, Ai, Xuanjun, Portaliou, Athina G., Minetti, Conceicao A.S.A., Remeta, David P., Economou, Anastassios, Kalodimos, Charalampos G.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.30 MB

english, 2013

33

Substrate-Activated Conformational Switch on Chaperones Encodes a Targeting Signal in Type III Secretion

Chen, Li, Ai, Xuanjun, Portaliou, Athina G., Minetti, Conceicao A.S.A., Remeta, David P., Economou, Anastassios, Kalodimos, Charalampos G.

Journal:

Year:

2013

Language:

english

File:

PDF, 45 KB

english, 2013

34

Iron-57 Nuclear Shieldings as a Quantitative Tool for Estimating Porphyrin Ruffling in Hexacoordinated Carbonmonoxy Heme Model Compounds in Solution

Kalodimos, Charalampos G., Gerothanassis, Ioannis P., Rose, Eric, Hawkes, Geoffrey E., Pierattelli, Roberta

Journal:

Journal of the American Chemical Society

Year:

1999

Language:

english

File:

PDF, 92 KB

english, 1999

35

Carbon-13 Nuclear Shieldings as a Novel Method in Estimating Porphyrin Ruffling in Hexacoordinated Superstructured Heme Model Compounds in Solution

Kalodimos, Charalampos G., Gerothanassis, Ioannis P.

Journal:

Journal of the American Chemical Society

Year:

1998

Language:

english

File:

PDF, 68 KB

english, 1998

36

Carbon-13 and Oxygen-17 Chemical Shifts, ( 16 O/ 18 O) Isotope Effects on 13 C Chemical Shifts, and Vibrational Frequencies of Carbon Monoxide in Various Solvents and of the Fe−C−O Unit in Carbonmonoxy Heme Proteins and Synthetic Model Compounds

Kalodimos, Charalampos G., Gerothanassis, Ioannis P., Pierattelli, Roberta, Ancian, Bernard

Journal:

Inorganic Chemistry

Year:

1999

Language:

english

File:

PDF, 161 KB

english, 1999

37

Toward an Integrated Model of Protein−DNA Recognition as Inferred from NMR Studies on the L ac Repressor System

Kalodimos, Charalampos G., Boelens, Rolf, Kaptein, Robert

Journal:

Chemical Reviews

Year:

2004

Language:

english

File:

PDF, 1.63 MB

english, 2004

38

The role of slow and fast protein motions in allosteric interactions

Tzeng, Shiou-Ru, Kalodimos, Charalampos G.

Journal:

Biophysical Reviews

Year:

2015

Language:

english

File:

PDF, 530 KB

english, 2015

39

Cyclophilin A promotes cell migration via the Abl-Crk signaling pathway

Saleh, Tamjeed, Jankowski, Wojciech, Sriram, Ganapathy, Rossi, Paolo, Shah, Shreyas, Lee, Ki-Bum, Cruz, Lissette Alicia, Rodriguez, Alexis J, Birge, Raymond B, Kalodimos, Charalampos G

Journal:

Nature Chemical Biology

Year:

2015

Language:

english

File:

PDF, 2.01 MB

english, 2015

40

Dynamic fluctuations lubricate the circadian clock

Ming-Tao Pai and Charalampos Kalodimos

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 436 KB

english, 2011

41

ExploitingE. coliauxotrophs for leucine, valine, and threonine specific methyl labeling of large proteins for NMR applications

Monneau, Yoan R., Ishida, Yojiro, Rossi, Paolo, Saio, Tomohide, Tzeng, Shiou-Ru, Inouye, Masayori, Kalodimos, Charalampos G.

Journal:

Journal of Biomolecular NMR

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

42

Structural basis for the antifolding activity of a molecular chaperone

Huang, Chengdong, Rossi, Paolo, Saio, Tomohide, Kalodimos, Charalampos G.

Journal:

Year:

2016

Language:

english

File:

PDF, 15.90 MB

english, 2016

43

Recognition and targeting mechanisms by chaperones in flagellum assembly and operation

Khanra, Nandish, Rossi, Paolo, Economou, Anastassios, Kalodimos, Charalampos G.

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.67 MB

english, 2016

44

Preprotein mature domains contain translocase targeting signals that are essential for secretion

Chatzi, Katerina E., Sardis, Marios Frantzeskos, Tsirigotaki, Alexandra, Koukaki, Marina, Šoštarić, Nikolina, Konijnenberg, Albert, Sobott, Frank, Kalodimos, Charalampos G., Karamanou, Spyridoula, Eco

Journal:

The Journal of Cell Biology

Year:

2017

Language:

english

File:

PDF, 1.88 MB

english, 2017

45

NMR Studies of Large Proteins

Jiang, Yajun, Kalodimos, Charalampos G.

Journal:

Journal of Molecular Biology

Year:

2017

Language:

english

File:

PDF, 671 KB

english, 2017

46

Optimization of 1H decoupling eliminates sideband artifacts in 3D TROSY-based triple resonance experiments

Xia, Youlin, Rossi, Paolo, Tonelli, Marco, Huang, Chengdong, Kalodimos, Charalampos G., Veglia, Gianluigi

Journal:

Journal of Biomolecular NMR

Year:

2017

Language:

english

File:

PDF, 1.71 MB

english, 2017

47

Hierarchical protein targeting and secretion is controlled by an affinity switch in the type III secretion system of enteropathogenic Escherichia coli

Portaliou, Athina G, Tsolis, Konstantinos C, Loos, Maria S, Balabanidou, Vassileia, Rayo, Josep, Tsirigotaki, Alexandra, Crepin, Valerie F, Frankel, Gad, Kalodimos, Charalampos G, Karamanou, Spyridoul

Journal:

The EMBO Journal

Year:

2017

Language:

english

File:

PDF, 2.26 MB

english, 2017

48

Automatic methyl assignment in large proteins by the MAGIC algorithm

Monneau, Yoan R., Rossi, Paolo, Bhaumik, Anusarka, Huang, Chengdong, Jiang, Yajun, Saleh, Tamjeed, Xie, Tao, Xing, Qiong, Kalodimos, Charalampos G.

Journal:

Journal of Biomolecular NMR

Year:

2017

Language:

english

File:

PDF, 2.62 MB

english, 2017

49

Enhancing the sensitivity of multidimensional NMR experiments by using triply-compensated π pulses

Xia, Youlin, Rossi, Paolo, Subrahmanian, Manu V., Huang, Chengdong, Saleh, Tamjeed, Olivieri, Cristina, Kalodimos, Charalampos G., Veglia, Gianluigi

Journal:

Journal of Biomolecular NMR

Year:

2017

Language:

english

File:

PDF, 2.07 MB

english, 2017

50

Structures of chaperone-substrate complexes docked onto the export gate in a type III secretion system

Xing, Qiong, Shi, Ke, Portaliou, Athina, Rossi, Paolo, Economou, Anastassios, Kalodimos, Charalampos G.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 3.62 MB

english, 2018